Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hmx2H6 family homeobox 2. (273 aa)    
Predicted Functional Partners:
lmo4
LIM domain only 4b.
    
 0.522
LOC110962005
Si:dkey-90l8.3.
    
 0.522
LOC110959789
LIM domain only 4a.
    
 0.522
LOC110967737
Ets variant 4.
    
 
 0.478
LOC110948065
Homeobox domain-containing protein.
    
 0.461
LOC110968771
Homeobox domain-containing protein.
    
 0.461
LOC110957150
Pre-B-cell leukemia homeobox 1a.
    
 0.461
LOC110956057
Homeobox domain-containing protein.
    
 0.461
LOC110954864
Pre-B-cell leukemia homeobox 2.
    
 0.461
LOC110962413
Pre-B-cell leukemia transcription factor 4.
    
 0.461
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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