Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110946858Neuroligin 3b. (821 aa)    
Predicted Functional Partners:
LOC110948798
Uncharacterized protein.
    
 0.914
ENSAPOP00000012449
Neurexin 2b.
    
 0.914
LOC110966783
Uncharacterized protein.
    
 0.914
LOC110961804
Neurexin 1a.
    
 0.912
LOC110966748
Uncharacterized protein.
    
 0.912
ENSAPOP00000021550
Uncharacterized protein.
    
 0.912
ENSAPOP00000025504
Uncharacterized protein.
    
 0.912
ENSAPOP00000000154
Neurexin 3a.
    
 0.908
LOC110956186
Uncharacterized protein.
    
 0.908
LOC110968003
LAM_G_DOMAIN domain-containing protein.
    
 0.908
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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