STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef12Rho guanine nucleotide exchange factor (GEF) 12a. (1500 aa)    
Predicted Functional Partners:
LOC110962182
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.960
LOC110959430
Uncharacterized protein.
    
 0.960
LOC110964518
Uncharacterized protein.
   
 0.956
LOC110949650
Uncharacterized protein.
   
 0.956
LOC110959450
Uncharacterized protein.
   
 0.956
LOC110951080
Ras homolog gene family, member Ab.
   
 0.956
gna12
G protein subunit alpha 12.
    
 0.939
ENSAPOP00000028391
Uncharacterized protein.
    
 0.939
mras
Muscle RAS oncogene homolog.
    
 0.925
rras2
RAS related 2.
    
  0.924
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.