STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef18Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1055 aa)    
Predicted Functional Partners:
LOC110949650
Uncharacterized protein.
   
 0.919
LOC110958078
Ras homolog family member Ca.
   
 0.865
LOC110964518
Uncharacterized protein.
   
 0.865
RHOB
Ras homolog family member B.
   
 0.865
LOC110959450
Uncharacterized protein.
   
 0.865
LOC110958145
Uncharacterized protein.
   
 0.865
LOC110951080
Ras homolog gene family, member Ab.
   
 0.865
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
     
 0.827
ENSAPOP00000026071
Si:dkey-238m4.3.
     
 0.826
LOC110970946
Cingulin a.
     
 0.826
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.