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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (134 aa)    
Predicted Functional Partners:
LOC110949310
Methyl-CpG binding domain protein 3a.
   
 
 0.703
LOC110959127
Methyl-CpG binding domain protein 2.
   
 
 0.703
LOC110967139
Uncharacterized protein.
   
 
 0.702
LOC110953527
GATA zinc finger domain containing 2A.
    
 
 0.654
gatad2b
GATA zinc finger domain containing 2B.
    
 
 0.654
mta1
Metastasis associated 1.
    
 
 0.654
LOC110948364
Metastasis associated 1 family, member 3.
    
 
 0.654
gatad2a
GATA zinc finger domain containing 2Ab.
    
 
 0.654
mta2
Metastasis associated 1 family, member 2.
    
 
 0.654
rbbp4
WD_REPEATS_REGION domain-containing protein.
   
 
 0.635
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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