STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110953570Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.902
mosmo
Uncharacterized protein.
  
  
 
0.893
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
 0.663
ENSAPOP00000013770
Uncharacterized protein.
   
 0.663
LOC110972685
Uncharacterized protein.
   
 0.663
ogfod2
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
   
 0.663
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
 0.663
plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
   
 0.663
rnf157
Ring finger protein 157.
      
 0.482
setd5
SET domain containing 5.
      
 0.420
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.