Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110968875Zona pellucida glycoprotein 3d tandem duplicate 2. (503 aa)    
Predicted Functional Partners:
efcab2
EF-hand calcium binding domain 2.
      
 0.682
morn3
MORN repeat containing 3.
      
 0.657
LOC110961449
Zygote arrest 1-like.
   
  
 0.657
ropn1l
Rhophilin associated tail protein 1-like.
      
 0.536
cfap52
Cilia and flagella associated protein 52.
      
 0.528
LOC110959523
Ataxin 7-like 2a.
  
     0.419
LOC110961530
Tektin 1.
      
 0.402
sqor
Sulfide quinone oxidoreductase.
      
 0.402
LOC110957155
Spermatogenesis associated 18.
      
 0.400
LOC110972964
Mitochondria-eating protein-like.
      
 0.400
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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