STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmi2RecQ mediated genome instability 2. (144 aa)    
Predicted Functional Partners:
rmi1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
 0.999
fancm
Helicase C-terminal domain-containing protein.
    
 0.999
ENSAPOP00000011687
Helicase ATP-binding domain-containing protein.
    
 0.999
top3a
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.990
tdrd3
Tudor domain containing 3.
    
 0.987
slf1
SMC5-SMC6 complex localization factor 1.
     
 0.982
blm
BLM RecQ like helicase.
   
 0.970
ENSAPOP00000030017
Uncharacterized protein.
   
 0.970
ercc4
Excision repair cross-complementation group 4.
    
 0.968
ENSAPOP00000024129
Uncharacterized protein.
    
 0.968
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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