STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)    
Predicted Functional Partners:
LOC110965789
General transcription factor IIA, 1.
    
 0.999
taf8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.997
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.997
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.996
ENSAPOP00000014349
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.995
taf13
TATA-box binding protein associated factor 13.
   
 0.995
LOC110961851
General transcription factor IIA, 1-like.
    
 0.995
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.994
LOC110967318
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.993
tbpl1
TBP-like 1.
   
 0.991
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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