STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961170C2H2-type domain-containing protein. (346 aa)    
Predicted Functional Partners:
ENSAPOP00000015417
Uncharacterized protein.
    
 0.895
LOC110946601
Ubiquitin-conjugating enzyme E2 variant 1.
     
  0.816
nectin2
Si:ch73-22o12.1.
    
  0.771
LOC110950641
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.754
rag2
Recombination activating gene 2.
   
 0.752
pla2g4a
Phospholipase A2.
     
 0.743
LOC110948645
BRCA1 associated RING domain 1.
    
 0.677
babam1
BRISC and BRCA1 A complex member 1.
    
 0.664
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.639
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
  0.637
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.