STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961170C2H2-type domain-containing protein. (346 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.907
ENSAPOP00000015417
Uncharacterized protein.
    
 0.877
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
    
 0.850
LOC110969830
Heme-binding protein soul4.
    
 0.850
nectin2
Si:ch73-22o12.1.
   
 0.839
LOC110946601
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.826
pla2g4a
Phospholipase A2.
     
 0.824
rag2
Recombination activating gene 2.
   
 0.814
babam1
BRISC and BRCA1 A complex member 1.
    
 0.790
LOC110950641
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
     
 0.779
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.