Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970176Uncharacterized protein. (997 aa)    
Predicted Functional Partners:
il16
Interleukin 16.
    
  0.887
LOC110968430
Uncharacterized protein.
    
  0.887
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.804
ENSAPOP00000005695
Secretory calcium-binding phosphoprotein 5.
    
 0.719
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.695
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.695
asmtl
Acetylserotonin O-methyltransferase-like.
    
  0.690
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
    
 0.674
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.666
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.626
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.