STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001952PH domain-containing protein. (53 aa)    
Predicted Functional Partners:
ENSAPOP00000000115
Uncharacterized protein.
   
 0.642
LOC110949164
ADP-ribosylation factor 3b; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LOC110964383
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LOC110956661
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LOC110958224
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
ARL6
ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
arf3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LOC110961315
ADP-ribosylation factor 2b; Belongs to the small GTPase superfamily. Arf family.
   
 0.642
LOC110957512
ADP-ribosylation factor-like 5C; Belongs to the small GTPase superfamily. Arf family.
   
 0.636
arl5b
ADP-ribosylation factor-like 8; Belongs to the small GTPase superfamily. Arf family.
   
 0.636
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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