STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001952PH domain-containing protein. (53 aa)    
Predicted Functional Partners:
mnat1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
      
 0.669
tmtc4
Transmembrane O-mannosyltransferase targeting cadherins 4.
      
 0.655
trip4
Thyroid hormone receptor interactor 4.
      
 0.655
cope
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.648
rspry1
Ring finger and SPRY domain containing 1.
      
 0.637
gpatch3
G patch domain containing 3.
      
 0.631
ENSAPOP00000000115
Uncharacterized protein.
   
 0.630
LOC110949164
ADP-ribosylation factor 3b; Belongs to the small GTPase superfamily. Arf family.
   
 0.630
LOC110964383
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.630
LOC110956661
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
   
 0.630
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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