STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001955Uncharacterized protein. (639 aa)    
Predicted Functional Partners:
ENSAPOP00000027509
Si:dkeyp-81f3.4.
   
 
 0.990
efcab7
EF-hand calcium binding domain 7.
    
   0.974
LOC110972665
IQ motif and ubiquitin domain containing.
   
 
 0.951
ccdc151
Uncharacterized protein.
    
 0.912
wdr78
WD repeat domain 78.
    
 
 0.903
LOC110961967
Uncharacterized protein.
   
 
 0.903
maats1
MYCBP-associated, testis expressed 1.
    
 0.889
LOC110961991
Uncharacterized protein.
   
 
 0.889
tcte1
T-complex-associated-testis-expressed 1.
    
 0.886
nme5
NME/NM23 family member 5; Belongs to the NDK family.
   
 
 0.881
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.