Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mscMusculin (activated B-cell factor-1). (166 aa)    
Predicted Functional Partners:
ENSAPOP00000004334
Uncharacterized protein.
    
 0.756
LOC110967144
Transcription factor 3a.
    
 0.756
LOC110949229
Transcription factor 3b.
    
 0.756
LOC110950375
BHLH domain-containing protein.
    
 0.756
ENSAPOP00000030307
Uncharacterized protein.
    
 0.756
tcf12
Transcription factor 12.
    
 0.756
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
    
   0.679
zbtb49
Zinc finger and BTB domain containing 49.
    
 
 0.619
nkx3-2
NK3 homeobox 2.
    
 0.586
ldb1
LIM-domain binding 1b.
    
 0.531
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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