STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprcProtein tyrosine phosphatase receptor type C. (790 aa)    
Predicted Functional Partners:
lck
Tyrosine-protein kinase.
   
 0.957
LOC110958739
Tyrosine-protein kinase.
   
 0.936
hck
Tyrosine-protein kinase.
   
 0.936
YES1
Tyrosine-protein kinase.
   
 0.936
ENSAPOP00000016137
BLK proto-oncogene, Src family tyrosine kinase.
   
 0.936
LOC110951999
Tyrosine-protein kinase.
   
 0.936
LOC110949553
Tyrosine-protein kinase.
   
 0.936
LOC110948328
Tyrosine-protein kinase.
   
 0.936
LOC110955923
Tyrosine-protein kinase.
   
 0.913
LOC110952284
Tyrosine-protein kinase.
   
 0.913
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.