Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cib3Calcium and integrin binding family member 3. (170 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.880
tmc3
Transmembrane channel-like protein.
    
 0.847
LOC110957814
Transmembrane channel-like protein.
    
 0.847
tmie
Transmembrane inner ear.
     
 0.730
ENSAPOP00000013451
Ninein (GSK3B interacting protein).
    
 
 0.721
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.719
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.694
ptprg
Carbonic anhydrase XVI b.
    
 
 0.660
LOC110970775
Uncharacterized protein.
    
 
 0.656
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.652
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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