STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hapln4Hyaluronan and proteoglycan link protein 4. (397 aa)    
Predicted Functional Partners:
ENSAPOP00000025542
C-type lectin domain-containing protein.
 
  
  0.860
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
    
 0.541
frem1
Fras1 related extracellular matrix 1a.
    
 0.541
ENSAPOP00000009286
Uncharacterized protein.
   
 0.535
ENSAPOP00000031368
Uncharacterized protein.
   
 0.535
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.533
mst1r
Macrophage stimulating 1 receptor b.
    
  0.533
LOC110972771
Uncharacterized protein.
    
  0.533
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.529
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.529
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.