Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110965385Calreticulin. (426 aa)    
Predicted Functional Partners:
pdia3
Protein disulfide-isomerase.
   
 0.986
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.986
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.974
ENSAPOP00000007947
Ig-like domain-containing protein.
    
 0.962
ENSAPOP00000031908
Uncharacterized protein.
    
 0.962
LOC110958977
Protein disulfide-isomerase.
   
 0.960
p4hb
Protein disulfide-isomerase.
   
 0.933
LOC110958780
Protein disulfide-isomerase.
   
 0.933
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
   
 0.932
LOC110972938
Uncharacterized protein.
   
 0.922
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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