STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001976Heterogeneous nuclear ribonucleoprotein A0. (306 aa)    
Predicted Functional Partners:
LOC110968957
Heterogeneous nuclear ribonucleoprotein M.
   
 0.969
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.944
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.935
rbmx
RNA binding motif protein X-linked.
  
0.915
hnrnpc
RRM domain-containing protein.
   
 0.906
ENSAPOP00000017443
RRM domain-containing protein.
   
 0.906
hnrnph1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.881
cirbp
Cold inducible RNA binding protein b.
  
0.852
LOC110950770
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.828
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.824
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.