STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110957578Im:7138239. (318 aa)    
Predicted Functional Partners:
nfyb
Nuclear transcription factor Y, beta a.
   
 0.977
nfya
Nuclear transcription factor Y, alpha, like.
    
 0.976
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.923
LOC110946883
CBFD_NFYB_HMF domain-containing protein.
    
 0.923
pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.761
LOC110969597
Cyclin-dependent kinase 16.
   
 0.642
LOC110957520
Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.
   
 0.642
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
   
 0.642
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.642
ENSAPOP00000010713
Uncharacterized protein.
   
 0.642
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.