Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cdo1Cysteine dioxygenase. (201 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.980
cth
Cystathionase (cystathionine gamma-lyase), like.
     
 0.955
gclc
Glutamate-cysteine ligase, catalytic subunit.
     
 0.953
LOC110970625
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.942
LOC110952327
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.935
LOC110968272
Glutamate decarboxylase 1a.
     
 0.920
LOC110951974
Glutamate decarboxylase 1b.
     
 0.920
gad2
Glutamate decarboxylase 2.
     
 0.905
gclm
Glutamate-cysteine ligase, modifier subunit.
   
 
 0.904
ENSAPOP00000002617
Uncharacterized protein.
     
 0.899
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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