Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970167PID domain-containing protein. (177 aa)    
Predicted Functional Partners:
ENSAPOP00000003936
Stabilin 2.
    
 0.901
ENSAPOP00000023872
Uncharacterized protein.
    
 0.901
scarf1
Scavenger receptor class F, member 1.
    
 0.901
LOC110957294
Low density lipoprotein receptor-related protein 1Ab.
    
  0.895
LOC110960676
Low density lipoprotein receptor-related protein 1Aa.
    
  0.895
megf11
Multiple EGF-like-domains 11.
    
 0.894
megf10
Multiple EGF-like-domains 10.
    
 0.894
LOC110968495
Uncharacterized protein.
    
 0.889
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.881
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.881
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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