Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002157Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
zmpste24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.977
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.955
LOC110958035
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.921
fnta
Farnesyltransferase, CAAX box, alpha.
     
 0.919
churc1
Churchill domain containing 1.
    
 0.894
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.793
oma1
OMA1 zinc metallopeptidase.
    
 0.787
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
   0.726
CDC25B
Cell division cycle 25B.
     
 0.706
usp42
Ubiquitin specific peptidase 42; Belongs to the peptidase C19 family.
     
 0.677
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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