Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110967642Galectin. (299 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.923
ENSAPOP00000030444
PDZ binding kinase.
    
   0.872
LOC110972205
Ig-like domain-containing protein.
    
 0.861
slc38a9
Solute carrier family 38 member 9.
    
 
 0.859
LOC110964712
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 
 0.802
LOC110953226
Galectin.
    
 
 0.748
lgals3
Galectin.
    
 
 0.747
LOC110951401
Galectin.
    
 
 0.746
LOC110967465
Ras-related GTP binding A.
    
 
 0.734
LOC110957631
Ig-like domain-containing protein.
    
   0.728
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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