Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110962891Uncharacterized protein. (1117 aa)    
Predicted Functional Partners:
zmat3
Zinc finger, matrin-type 3.
   
  
 0.670
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
      
 0.651
LOC110972183
TPR_REGION domain-containing protein.
      
 0.597
ENSAPOP00000030187
Nucleic_acid_bd domain-containing protein.
      
 0.595
morn5
MORN repeat containing 5.
   
  
 0.577
prr16
Proline rich 16.
      
 0.571
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.569
ENSAPOP00000033594
ASH domain-containing protein.
      
 0.554
kcnv1
Potassium voltage-gated channel modifier subfamily V member 1; Belongs to the potassium channel family.
   
  
 0.546
ttll11
Tubulin tyrosine ligase-like family, member 11.
   
  
 0.538
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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