Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002286DDE_3 domain-containing protein. (103 aa)    
Predicted Functional Partners:
fyb1
Uncharacterized protein.
   
 0.759
grb2
Growth factor receptor-bound protein 2b.
    
 0.723
LOC110969860
GRB2 related adaptor protein 2b.
   
 0.708
LOC110954136
GRB2 related adaptor protein 2a.
   
 0.708
syk
Tyrosine-protein kinase.
   
 0.641
LOC110956203
Tyrosine-protein kinase.
   
 0.641
nck2
Cytoplasmic protein.
    
 0.632
nck1
Cytoplasmic protein.
    
 0.632
LOC110961220
FH2 domain-containing protein.
    
 0.628
ENSAPOP00000003337
FH2 domain-containing protein.
    
 0.628
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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