STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959388MCF.2 cell line derived transforming sequence b. (990 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.731
LOC110951271
Cell division cycle 42.
    
 0.731
LOC110966235
Cell division cycle 42, like.
    
 0.704
LOC110961360
Uncharacterized protein.
    
 0.704
LOC110958078
Ras homolog family member Ca.
    
 0.594
LOC110964518
Uncharacterized protein.
    
 0.594
RHOB
Ras homolog family member B.
    
 0.594
LOC110949650
Uncharacterized protein.
    
 0.594
LOC110959450
Uncharacterized protein.
    
 0.594
LOC110958145
Uncharacterized protein.
    
 0.594
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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