STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps6kc1Ribosomal protein S6 kinase polypeptide 1. (1124 aa)    
Predicted Functional Partners:
rint1
RAD50 interactor 1.
   
 0.995
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.994
stx18
Syntaxin 18.
    
 0.993
zw10
Zw10 kinetochore protein.
    
 0.993
nbas
Neuroblastoma amplified sequence.
   
 0.970
snx12
Sorting nexin 12.
     
 0.838
ENSAPOP00000007008
Sorting nexin 10a.
     
 0.838
snx3
Sorting nexin 3.
     
 0.838
snx11
PX domain-containing protein.
     
 0.838
snx10
Sorting nexin 10b.
     
 0.838
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.