STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINA4Serpin family A member 4; Belongs to the serpin family. (420 aa)    
Predicted Functional Partners:
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
  
 0.784
proc
Uncharacterized protein.
  
  0.662
hgfac
HGF activator.
  
 0.649
LOC110963673
Uncharacterized protein.
  
 0.625
HABP2
Hyaluronan binding protein 2.
  
 0.625
vtn
Vitronectin a.
   
 0.620
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
  
0.610
LOC110959651
Vitronectin b.
   
 0.589
LOC110963207
Low density lipoprotein receptor-related protein 5.
    
 0.579
lrp6
Low density lipoprotein receptor-related protein 6.
    
 0.579
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.