Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110970769MAM domain containing 2a. (648 aa)    
Predicted Functional Partners:
ncapd3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.658
ENSAPOP00000005471
Protein kinase domain-containing protein.
    
  0.537
ENSAPOP00000028536
Ig-like domain-containing protein.
    
  0.537
LOC110957895
Uncharacterized protein.
    
  0.537
fam163a
Si:dkey-171o17.8.
      
 0.531
rab21
RAB21, member RAS oncogene family.
      
 0.521
LOC110954531
Vav 3 guanine nucleotide exchange factor b.
    
 0.503
ntng1
Netrin g1a.
    
 0.503
ENSAPOP00000024610
Uncharacterized protein.
    
  0.494
ENSAPOP00000028898
Uncharacterized protein.
    
  0.494
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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