STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955917Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (356 aa)    
Predicted Functional Partners:
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.954
LOC110957889
PRKG1_interact domain-containing protein.
  
 0.950
LOC110950638
Protein phosphatase 1 regulatory subunit.
  
 0.950
LOC110951083
WD_REPEATS_REGION domain-containing protein.
    
 0.949
LOC110960657
WD repeat domain 82.
    
 0.949
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.948
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.948
WDR33
WD repeat domain 33.
   
 0.947
ENSAPOP00000007876
Uncharacterized protein.
    
 0.939
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
  
 0.937
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.