ENSAPOP00000002467 protein (Acanthochromis polyacanthus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

Experiments

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[Homology]

Score

ENSAPOP00000002467

Uncharacterized protein. (89 aa)

Predicted Functional Partners:

dtna

0.912

dtnb

0.912

LOC110955027

0.867

LOC110956467

0.733

LOC110956370

0.733

ENSAPOP00000006365

0.733

ENSAPOP00000008567

0.733

utrn

0.733

ENSAPOP00000025371

0.733

ENSAPOP00000027851

0.733

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000002467	ENSAPOP00000006365	ENSAPOP00000002467	ENSAPOP00000006365	Uncharacterized protein.	Uncharacterized protein.	0.733
ENSAPOP00000002467	ENSAPOP00000008567	ENSAPOP00000002467	ENSAPOP00000008567	Uncharacterized protein.	EF-hand_2 domain-containing protein.	0.733
ENSAPOP00000002467	ENSAPOP00000025371	ENSAPOP00000002467	ENSAPOP00000025371	Uncharacterized protein.	Uncharacterized protein.	0.733
ENSAPOP00000002467	ENSAPOP00000027851	ENSAPOP00000002467	ENSAPOP00000027851	Uncharacterized protein.	Dystrophin.	0.733
ENSAPOP00000002467	LOC110955027	ENSAPOP00000002467	ENSAPOP00000027796	Uncharacterized protein.	Dystrobrevin.	0.867
ENSAPOP00000002467	LOC110956370	ENSAPOP00000002467	ENSAPOP00000004260	Uncharacterized protein.	Dystrophin related protein 2.	0.733
ENSAPOP00000002467	LOC110956467	ENSAPOP00000002467	ENSAPOP00000000841	Uncharacterized protein.	Uncharacterized protein.	0.733
ENSAPOP00000002467	dtna	ENSAPOP00000002467	ENSAPOP00000022792	Uncharacterized protein.	Dystrobrevin.	0.912
ENSAPOP00000002467	dtnb	ENSAPOP00000002467	ENSAPOP00000031293	Uncharacterized protein.	Dystrobrevin.	0.912
ENSAPOP00000002467	utrn	ENSAPOP00000002467	ENSAPOP00000025216	Uncharacterized protein.	Uncharacterized protein.	0.733
ENSAPOP00000006365	ENSAPOP00000002467	ENSAPOP00000006365	ENSAPOP00000002467	Uncharacterized protein.	Uncharacterized protein.	0.733
ENSAPOP00000006365	ENSAPOP00000025371	ENSAPOP00000006365	ENSAPOP00000025371	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSAPOP00000006365	LOC110955027	ENSAPOP00000006365	ENSAPOP00000027796	Uncharacterized protein.	Dystrobrevin.	0.846
ENSAPOP00000006365	LOC110956370	ENSAPOP00000006365	ENSAPOP00000004260	Uncharacterized protein.	Dystrophin related protein 2.	0.829
ENSAPOP00000006365	LOC110956467	ENSAPOP00000006365	ENSAPOP00000000841	Uncharacterized protein.	Uncharacterized protein.	0.879
ENSAPOP00000006365	dtna	ENSAPOP00000006365	ENSAPOP00000022792	Uncharacterized protein.	Dystrobrevin.	0.891
ENSAPOP00000006365	dtnb	ENSAPOP00000006365	ENSAPOP00000031293	Uncharacterized protein.	Dystrobrevin.	0.887
ENSAPOP00000008567	ENSAPOP00000002467	ENSAPOP00000008567	ENSAPOP00000002467	EF-hand_2 domain-containing protein.	Uncharacterized protein.	0.733
ENSAPOP00000008567	LOC110955027	ENSAPOP00000008567	ENSAPOP00000027796	EF-hand_2 domain-containing protein.	Dystrobrevin.	0.874
ENSAPOP00000008567	dtna	ENSAPOP00000008567	ENSAPOP00000022792	EF-hand_2 domain-containing protein.	Dystrobrevin.	0.896