Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bap1Ubiquitin carboxyl-terminal hydrolase. (742 aa)    
Predicted Functional Partners:
asxl2
ASXL transcriptional regulator 2.
   
 0.999
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.992
LOC110948645
BRCA1 associated RING domain 1.
    
 0.990
KDM1B
Lysine demethylase 1B.
    
 0.989
ENSAPOP00000013749
HARE-HTH domain-containing protein.
   
 0.988
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 0.981
psmd8
Proteasome 26S subunit, non-ATPase 8.
   
 0.980
adrm1
Adhesion regulating molecule 1.
    
 0.979
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.975
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.973
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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