Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
robo4Roundabout, axon guidance receptor, homolog 4 (Drosophila). (1085 aa)    
Predicted Functional Partners:
LOC110954598
Slit homolog 3 (Drosophila).
   
 0.918
slit2
Slit homolog 2 (Drosophila).
   
 0.911
LOC110966075
Slit guidance ligand 1.
   
 0.911
LOC110953156
Slit homolog 1a (Drosophila).
   
 0.911
abl2
Tyrosine-protein kinase.
   
 0.888
abl1
Tyrosine-protein kinase.
   
 0.888
nyx
Nyctalopin.
   
 0.844
robo3
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.839
nck2
Cytoplasmic protein.
    
 0.814
nck1
Cytoplasmic protein.
    
 0.814
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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