Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
als2Alsin Rho guanine nucleotide exchange factor ALS2 b. (1697 aa)    
Predicted Functional Partners:
cfap410
Cilia and flagella associated protein 410.
   
 
 0.974
LOC110971693
RAB5B, member RAS oncogene family.
    
 0.911
LOC110949572
Uncharacterized protein.
    
 0.907
LOC110961874
RAB5A, member RAS oncogene family, a.
    
 0.907
LOC110952764
Uncharacterized protein.
    
 0.907
LOC110961427
RAB5C, member RAS oncogene family.
    
 0.907
LOC110950836
RAB5A, member RAS oncogene family, b.
    
 0.907
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.899
LOC110964394
RAN binding protein 2.
  
 0.896
LOC110969864
Rac family small GTPase 2.
    
 0.884
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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