Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110951763Cathepsin Bb; Belongs to the peptidase C1 family. (331 aa)    
Predicted Functional Partners:
LOC110959161
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.940
ctsa
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.940
LOC110968736
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.921
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.915
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.915
LOC110965153
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.910
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.910
LOC110956085
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.909
CTSH
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.909
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.908
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.