Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tpd52l2Tpd52 like 2b. (227 aa)    
Predicted Functional Partners:
tpd52
Tumor protein D52.
   
   0.975
tpd52l1
Tpd52 like 1.
    
   0.973
gabpa
GA binding protein transcription factor subunit alpha.
    
   0.924
gabpb2
GA binding protein transcription factor subunit beta 2a.
    
  0.909
nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.801
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
    
 
 0.719
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.707
ppp5c
Serine/threonine-protein phosphatase.
      
 0.684
pcmt1
Protein-L-isoaspartate O-methyltransferase.
      
 0.648
gak
Cyclin G associated kinase.
     
 0.643
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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