STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERHEnhancer of rudimentary homolog; May have a role in the cell cycle. (104 aa)    
Predicted Functional Partners:
ENSAPOP00000022281
Small nuclear ribonucleoprotein polypeptide F.
   
   0.857
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
   0.855
snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
  
 0.841
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.836
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
   0.831
chtop
Chromatin target of PRMT1a.
   
 
 0.823
ALYREF
Aly/REF export factor.
   
 
 0.767
LOC110959242
Small nuclear ribonucleoprotein G.
   
    0.746
LOC110946918
Small nuclear ribonucleoprotein G.
   
    0.746
ilf2
Interleukin enhancer binding factor 2.
   
    0.696
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.