Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERHEnhancer of rudimentary homolog; May have a role in the cell cycle. (104 aa)    
Predicted Functional Partners:
chtop
Chromatin target of PRMT1a.
   
 
 0.967
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
   
 
 0.957
magoh
Mago homolog, exon junction complex subunit.
   
   0.932
LOC110953794
Cdkn1a interacting zinc finger protein 1a.
    
 
 0.910
ALYREF
Aly/REF export factor.
   
 
 0.910
ENSAPOP00000022281
Small nuclear ribonucleoprotein polypeptide F.
   
   0.889
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.888
LOC110951312
Scaffold attachment factor B.
   
 
 0.886
LOC110950479
RRM domain-containing protein.
   
 
 0.882
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.864
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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