Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110955895Ribosomal modification protein rimK-like family member A. (318 aa)    
Predicted Functional Partners:
LOC110953485
N-acetyltransferase domain-containing protein.
     
 0.943
nat8l
N-acetyltransferase 8-like.
     
 0.943
cs
Citrate synthase; Belongs to the citrate synthase family.
    
 0.924
idh3g
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.914
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.914
LOC110968075
Iso_dh domain-containing protein.
    
 0.914
aspa
Aspartoacylase.
     
 0.909
OGDH
Oxoglutarate dehydrogenase.
   
 0.904
ogdh
Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide).
   
 0.904
LOC110963778
Oxoglutarate dehydrogenase like.
   
 0.904
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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