Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fndc1Fibronectin type III domain containing 1. (1484 aa)    
Predicted Functional Partners:
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.885
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.885
hjv
Hemojuvelin BMP co-receptor.
    
 0.572
LOC110949487
RGM domain family, member D.
    
 0.572
rgmb
Repulsive guidance molecule BMP co-receptor b.
    
 0.572
rgma
Repulsive guidance molecule BMP co-receptor a.
    
 0.572
LOC110954531
Vav 3 guanine nucleotide exchange factor b.
    
 0.570
ntng1
Netrin g1a.
    
 0.570
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.559
LOC110970911
Uncharacterized protein.
    
 0.541
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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