Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002702Forkhead box G1d. (288 aa)    
Predicted Functional Partners:
ENSAPOP00000027648
Fork-head domain-containing protein.
     
  0.873
mecp2
Methyl CpG binding protein 2.
    
 0.781
foxn4
Forkhead box N4.
   
    0.746
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.728
suox
Sulfite oxidase.
     
  0.716
FOXJ3
Forkhead box J3.
     
  0.704
LOC110955905
Fork-head domain-containing protein.
     
  0.704
ENSAPOP00000013861
Trichorhinophalangeal syndrome I.
    
 0.697
dlx2
Distal-less homeobox 2b.
   
 
 0.688
dlx1
Distal-less homeobox 1a.
   
 
 0.681
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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