Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002736Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.951
LOC110951271
Cell division cycle 42.
   
 0.950
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.949
LOC110966235
Cell division cycle 42, like.
   
 0.918
LOC110961360
Uncharacterized protein.
   
 0.918
LOC110957012
Uncharacterized protein.
   
 0.899
LOC110954011
Uncharacterized protein.
    
 0.888
actb
Uncharacterized protein.
    
 0.885
LOC110969864
Rac family small GTPase 2.
   
 0.883
LOC110956736
Uncharacterized protein.
   
 0.883
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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