Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002771ATP binding cassette subfamily A member 1. (863 aa)    
Predicted Functional Partners:
LOC110956736
Uncharacterized protein.
    
 0.888
RAC1
Rac family small GTPase 1.
    
 0.888
LOC110953836
Uncharacterized protein.
    
 0.883
ENSAPOP00000029121
Uncharacterized protein.
    
 0.883
trip12
Thyroid hormone receptor interactor 12.
     
 0.862
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.849
LOC110950127
Zgc:172302.
     
  0.835
LOC110956887
Uncharacterized protein.
     
  0.832
abca3
ATP-binding cassette, sub-family A (ABC1), member 3b.
    
 0.788
LOC110969864
Rac family small GTPase 2.
    
 0.753
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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