Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110946378Tpd52 like 2a. (188 aa)    
Predicted Functional Partners:
tpd52
Tumor protein D52.
   
   0.874
tpd52l1
Tpd52 like 1.
    
   0.868
gabpa
GA binding protein transcription factor subunit alpha.
    
   0.824
gabpb2
GA binding protein transcription factor subunit beta 2a.
    
  0.812
gak
Cyclin G associated kinase.
     
 0.643
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
     
 0.575
snapin
SNAP associated protein.
   
 
  0.574
nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.568
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
    
 
 0.557
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.539
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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