STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110957050X-ray repair complementing defective repair in Chinese hamster cells 4. (336 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.968
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.964
nprl2
NPR2 like, GATOR1 complex subunit.
   
 0.963
wdr24
WD repeat domain 24.
    
 0.957
spcs2
Signal peptidase complex subunit 2.
   
 0.947
spcs1
Signal peptidase complex subunit 1.
   
 0.939
spcs3
Signal peptidase complex subunit 3.
   
 0.938
xrcc4
Uncharacterized protein.
  
  
 
0.900
LOC110961831
Uncharacterized protein.
    
 0.896
depdc5
DEP domain containing 5.
    
 0.896
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.