Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110957050X-ray repair complementing defective repair in Chinese hamster cells 4. (336 aa)    
Predicted Functional Partners:
lig4
DNA ligase.
   
 0.984
xrcc4
Uncharacterized protein.
  
  
 
0.943
kptn
Kaptin (actin binding protein).
    
 0.932
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.917
wdr24
WD repeat domain 24.
    
 0.915
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.909
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 0.890
xrcc5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
 0.889
paxx
PAXX non-homologous end joining factor.
     
 0.843
spcs2
Signal peptidase complex subunit 2.
   
 0.835
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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