STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002829POU domain protein. (254 aa)    
Predicted Functional Partners:
ENSAPOP00000004408
Uncharacterized protein.
    
  0.663
gtf2b
General transcription factor IIB.
    
 0.605
pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.595
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.589
LOC110960567
Spalt-like transcription factor 3b.
    
 0.574
sall3
Spalt-like transcription factor 3a.
    
 0.574
sall1
Spalt-like transcription factor 1a.
    
 0.574
sall4
Spalt-like transcription factor 4.
    
 0.574
LOC110967318
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
     
 0.566
snapc3
Small nuclear RNA activating complex, polypeptide 3.
   
 
  0.550
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.