Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000002829POU domain protein. (254 aa)    
Predicted Functional Partners:
ENSAPOP00000004408
Uncharacterized protein.
    
  0.581
cunh11orf53
Si:ch211-213d14.1.
    
 
 0.574
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
  0.565
pou4f1
POU domain protein.
   
 
 0.552
LOC110958999
POU domain protein.
   
 
 0.552
pou4f3
POU domain protein.
   
 
 0.552
pou4f2
POU domain protein.
   
 
 0.552
LOC110958744
HMG box domain-containing protein.
    
 0.546
ENSAPOP00000004485
SRY-box transcription factor 1a.
    
 0.546
SOX14
SRY-box transcription factor 14.
    
 0.546
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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