noa1 protein (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

noa1

Nitric oxide associated 1. (708 aa)

Predicted Functional Partners:

mrps27

0.980

mrps15

0.975

ENSAPOP00000021355

0.964

mrps26

0.956

mrps18b

0.952

eral1

0.937

mrps18c

0.935

dap3

0.935

tfb1m

0.930

mrps5

0.920

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000021355	dap3	ENSAPOP00000021355	ENSAPOP00000018279	Mitochondrial ribosomal protein S6.	Death associated protein 3.	0.998
ENSAPOP00000021355	eral1	ENSAPOP00000021355	ENSAPOP00000002609	Mitochondrial ribosomal protein S6.	Era-like 12S mitochondrial rRNA chaperone 1.	0.992
ENSAPOP00000021355	mrps15	ENSAPOP00000021355	ENSAPOP00000020785	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
ENSAPOP00000021355	mrps18b	ENSAPOP00000021355	ENSAPOP00000002333	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S18B.	0.998
ENSAPOP00000021355	mrps18c	ENSAPOP00000021355	ENSAPOP00000015989	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S18C.	0.997
ENSAPOP00000021355	mrps26	ENSAPOP00000021355	ENSAPOP00000003620	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S26.	0.999
ENSAPOP00000021355	mrps27	ENSAPOP00000021355	ENSAPOP00000028635	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S27.	0.998
ENSAPOP00000021355	mrps5	ENSAPOP00000021355	ENSAPOP00000004453	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
ENSAPOP00000021355	noa1	ENSAPOP00000021355	ENSAPOP00000002839	Mitochondrial ribosomal protein S6.	Nitric oxide associated 1.	0.964
ENSAPOP00000021355	tfb1m	ENSAPOP00000021355	ENSAPOP00000029530	Mitochondrial ribosomal protein S6.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.888
dap3	ENSAPOP00000021355	ENSAPOP00000018279	ENSAPOP00000021355	Death associated protein 3.	Mitochondrial ribosomal protein S6.	0.998
dap3	eral1	ENSAPOP00000018279	ENSAPOP00000002609	Death associated protein 3.	Era-like 12S mitochondrial rRNA chaperone 1.	0.997
dap3	mrps15	ENSAPOP00000018279	ENSAPOP00000020785	Death associated protein 3.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.998
dap3	mrps18b	ENSAPOP00000018279	ENSAPOP00000002333	Death associated protein 3.	Mitochondrial ribosomal protein S18B.	0.998
dap3	mrps18c	ENSAPOP00000018279	ENSAPOP00000015989	Death associated protein 3.	Mitochondrial ribosomal protein S18C.	0.993
dap3	mrps26	ENSAPOP00000018279	ENSAPOP00000003620	Death associated protein 3.	Mitochondrial ribosomal protein S26.	0.998
dap3	mrps27	ENSAPOP00000018279	ENSAPOP00000028635	Death associated protein 3.	Mitochondrial ribosomal protein S27.	0.999
dap3	mrps5	ENSAPOP00000018279	ENSAPOP00000004453	Death associated protein 3.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
dap3	noa1	ENSAPOP00000018279	ENSAPOP00000002839	Death associated protein 3.	Nitric oxide associated 1.	0.935
dap3	tfb1m	ENSAPOP00000018279	ENSAPOP00000029530	Death associated protein 3.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.872