Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERTM1Serine rich and transmembrane domain containing 1. (111 aa)    
Predicted Functional Partners:
TMEM164
Transmembrane protein 164.
      
 0.706
tmem14a
Zgc:163080.
      
 0.695
fam91a1
Family with sequence similarity 91 member A1.
      
 0.684
EGFLAM
EGF like, fibronectin type III and laminin G domains.
      
 0.589
mras
Muscle RAS oncogene homolog.
   
  
 0.578
ENSAPOP00000009286
Uncharacterized protein.
      
 0.566
dennd1a
DENN/MADD domain containing 1A.
      
 0.566
tjp3
Tight junction protein 3; Belongs to the MAGUK family.
      
 0.536
LOC110961066
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a; Belongs to the glycosyltransferase 29 family.
      
 0.508
LOC110955624
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.
      
 0.508
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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