Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
LOC110967150GLIS family zinc finger 1b. (1012 aa)    
Predicted Functional Partners:
fbxw11
F-box and WD repeat domain containing 11a.
    
 0.939
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
    
 0.933
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.892
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 0.873
spopl
Speckle type BTB/POZ protein like b.
   
 0.873
SPOP
Speckle type BTB/POZ protein.
   
 0.873
LOC110952108
Speckle type BTB/POZ protein.
   
 0.873
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.853
ptch2
Patched 2.
   
 0.816
ptch1
Patched 1.
   
 0.816
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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