Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110957049Hyaluronan and proteoglycan link protein 1b. (367 aa)    
Predicted Functional Partners:
ENSAPOP00000025542
C-type lectin domain-containing protein.
 
 
 0.967
LOC110961562
Aggrecan b.
   
 0.744
ENSAPOP00000025518
Aggrecan a.
   
 0.744
ENSAPOP00000029290
C-type lectin domain-containing protein.
   
 0.744
LOC110957541
Tenascin C.
   
 0.676
prdm5
Zinc finger protein.
    
 0.621
lum
Lumican.
    
 0.597
tnr
Tenascin R (restrictin, janusin).
   
 0.583
ENSAPOP00000009286
Uncharacterized protein.
   
 0.569
LOC110952900
Si:ch211-160f23.7.
      
 0.557
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.